Search for homologous protein sequences
Runs one protein-sequence search and returns the completed ranked results in the same response. Supply either a database id or slug to use its advertised current release, or supply one exact immutable database_release_id. The server resolves every scientific policy and reports every resolved identity, measurement, hash, warning, and usage value inline. No retained search resource, polling, or follow-up result request exists in the public API.
Authorizations
A Rafflesia API key, sent as Authorization: Bearer <key>.
Headers
Optional retry identity. Reuse the same key for the same request after an ambiguous failure. When omitted, the server derives an identity from the resolved scientific request.
255Body
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Database id or slug from homology.databases.list. Exactly one of database or database_release_id is required.
1 - 256Raw amino-acid sequence text. ASCII whitespace is ignored, letters are uppercased, and one trailing stop symbol is removed. The normalized sequence may contain at most 100,000 residues.
1 - 110000Exact immutable release id. Exactly one of database or database_release_id is required.
1Optional exact metadata predicate applied before candidate generation.
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Minimum search guarantee. Approximate permits a qualified approximate policy or a stronger exhaustive fallback; exhaustive requires the release's exhaustive reference policy.
approximate, exhaustive Scientific result representations to return. Pairwise alignment is included by default. Pass an empty array for candidate measurements only.
1alignment Optional target attributes to project. The current Tomato catalog can project record_id; unsupported attributes are rejected instead of fabricated.
1record_id Maximum number of ranked results to return.
1 <= x <= 10000Optional hard ceiling on deterministic billable work. The search fails before exceeding it.
x >= 1Whether database-aware significance is omitted, included when a compatible calibration exists, or required for the request to succeed.
not_requested, if_available, required Response
OK
Whether the operation succeeded.
Execution provenance.
Non-fatal warnings.
A URL to the JSON Schema for this object.
"https://example.com/schemas/EnvelopeHomologyResponse.json"
Operation result data.
Structured error information.
Mechanical evidence summary for agent inspection and chaining.